Electronic supplementary material Additional file 1: Table selleck chemicals S1: Comparison of the antioxidant defense systems in three UPEC (CFT073, UTI89, 536) and ABU 83972 strains during the mid-logarithmic growth phase in urine. (DOC 36 KB) Additional file 2: Table S2: Comparison of the antioxidant defense
systems of three UPEC (CFT073, UTI89, 536) and ABU 83972 strains during the stationary growth phase in urine. (DOC 34 KB) References 1. Tenaillon O, Skurnik D, Picard B, Denamur E: The population genetics of commensal Escherichia coli. Nat Rev Microbiol 2010,8(3):207–217.PubMedCrossRef 2. Russo TA, Johnson JR: Medical and economic impact of extraintestinal infections due to Escherichia coli: focus on an increasingly important endemic problem. Microbes Infect 2003,5(5):449–456.PubMedCrossRef 3. Gordon DM, Clermont O, Tolley H, Denamur E: Assigning Escherichia coli strains to phylogenetic groups: Selleck PD-1/PD-L1 Inhibitor 3 multi-locus sequence typing versus the PCR triplex method. CA4P Environ Microbiol 2008,10(10):2484–2496.PubMedCrossRef
4. Wirth T, Falush D, Lan R, Colles F, Mensa P, Wieler LH, Karch H, Reeves PR, Maiden MC, Ochman H, et al.: Sex and virulence in Escherichia coli: an evolutionary perspective. Mol Microbiol 2006,60(5):1136–1151.PubMedCrossRef 5. Desjardins P, Picard B, Kaltenböck B, Elion J, Denamur E: Sex in Escherichia coli does not disrupt the clonal structure of the population: evidence from random amplified polymorphic DNA and restriction-fragment-length polymorphism. J Mol Evol 1995,41(4):440–448.PubMedCrossRef 6. Picard B, Garcia JS, Gouriou S, Duriez P, Brahimi N, Bingen E, Elion J, Denamur E: The link between phylogeny and virulence in Escherichia coli extraintestinal infection. Infect Immun 1999,67(2):546–553.PubMed 7. Duriez P, Clermont O, Bonacorsi S, Bingen E, Chaventre A, Elion J, Picard B, Denamur E: Commensal Escherichia coli isolates are phylogenetically distributed among geographically distinct human populations. Microbiology 2001,147(6):1671–1676.PubMed
Decitabine 8. Stamm WE, Norrby SR: Urinary tract infections: disease panorama and challenges. J Infect Dis 2001,183(Suppl 1):S1-S4.PubMedCrossRef 9. Svanborg C, Godaly G: Bacterial virulence in urinary tract infection. Infect Dis Clin North Am 1997,11(3):513–529.PubMedCrossRef 10. Emody L, Kerenyi M, Nagy G: Virulence factors of uropathogenic Escherichia coli. Int J Antimicrob Agents 2003,22(Suppl 2):29–33.PubMedCrossRef 11. Roos V, Ulett GC, Schembri MA, Klemm P: The asymptomatic bacteriuria Escherichia coli strain 83972 outcompetes uropathogenic E. coli strains in human urine. Infect Immun 2006,74(1):615–624.PubMedCrossRef 12. Anfora AT, Haugen BJ, Roesch P, Redford P, Welch RA: Roles of serine accumulation and catabolism in the colonization of the murine urinary tract by Escherichia coli CFT073. Infect Immun 2007,75(11):5298–5304.PubMedCrossRef 13. Farr SB, Kogoma T: Oxidative stress responses in Escherichia coli and Salmonella typhimurium.